| a | 
| association analysis | An Association Analysis of Breast Cancer with Carotenoids. | 
| Attractors landscape | Uncovering the role of mutations in Epithelial-to-Mesenchymal transition through computational analysis of the underlying gene regulatory network | 
| b | 
| Bioinformatics | Biomarker discovery in multi-omics datasets using tensor decompositions; A comprehensive review Utilizing Functional Annotation of Disease Genes for Disease Clustering The Velvet Assembler Using OpenACC Directives | 
| biomarker discovery | Biomarker discovery in multi-omics datasets using tensor decompositions; A comprehensive review | 
| biomarkers | An Association Analysis of Breast Cancer with Carotenoids. | 
| c | 
| cancer | An Association Analysis of Breast Cancer with Carotenoids. | 
| Cell differentiation and morphogenesis | Clarifying the biological nature of the interaction between the systems-based epigenetic landscape and the epigenome | 
| CNN | Classifying Protein Families with Learned Compressed Representations | 
| complex networks | Uncovering the particularities of the dynamical interaction between cancer-related Epithelial-Mesenchymal Transition and the Mammalian Cell Cycle: a feedback-based Boolean networks interconnection approach | 
| COVID-19 | Uncovering the interdependence between hypertension and the inflammatory response for the patient affected by Covid 19 through mathematical modeling and computer-based analysis | 
| d | 
| Discrete Boolean networks | Uncovering the particularities of the dynamical interaction between cancer-related Epithelial-Mesenchymal Transition and the Mammalian Cell Cycle: a feedback-based Boolean networks interconnection approach Uncovering the interdependence between hypertension and the inflammatory response for the patient affected by Covid 19 through mathematical modeling and computer-based analysis Uncovering the role of mutations in Epithelial-to-Mesenchymal transition through computational analysis of the underlying gene regulatory network | 
| Disease clustering | Utilizing Functional Annotation of Disease Genes for Disease Clustering | 
| Disease similarity and relationship | Utilizing Functional Annotation of Disease Genes for Disease Clustering | 
| e | 
| Epigenetic regulation | Clarifying the biological nature of the interaction between the systems-based epigenetic landscape and the epigenome | 
| epigenomics | Clarifying the biological nature of the interaction between the systems-based epigenetic landscape and the epigenome | 
| Epithelial cancer | Uncovering the particularities of the dynamical interaction between cancer-related Epithelial-Mesenchymal Transition and the Mammalian Cell Cycle: a feedback-based Boolean networks interconnection approach Uncovering the role of mutations in Epithelial-to-Mesenchymal transition through computational analysis of the underlying gene regulatory network | 
| epithelial-to-mesenchymal transition | Uncovering the particularities of the dynamical interaction between cancer-related Epithelial-Mesenchymal Transition and the Mammalian Cell Cycle: a feedback-based Boolean networks interconnection approach Uncovering the role of mutations in Epithelial-to-Mesenchymal transition through computational analysis of the underlying gene regulatory network | 
| f | 
| Feedback-based interactions | Uncovering the particularities of the dynamical interaction between cancer-related Epithelial-Mesenchymal Transition and the Mammalian Cell Cycle: a feedback-based Boolean networks interconnection approach | 
| g | 
| gene mutations | Uncovering the role of mutations in Epithelial-to-Mesenchymal transition through computational analysis of the underlying gene regulatory network | 
| gene regulatory networks | Uncovering the particularities of the dynamical interaction between cancer-related Epithelial-Mesenchymal Transition and the Mammalian Cell Cycle: a feedback-based Boolean networks interconnection approach Uncovering the interdependence between hypertension and the inflammatory response for the patient affected by Covid 19 through mathematical modeling and computer-based analysis Uncovering the role of mutations in Epithelial-to-Mesenchymal transition through computational analysis of the underlying gene regulatory network | 
| h | 
| Human blood pressure patterns | Uncovering the interdependence between hypertension and the inflammatory response for the patient affected by Covid 19 through mathematical modeling and computer-based analysis | 
| human exposome | An Association Analysis of Breast Cancer with Carotenoids. | 
| Hypertension | Uncovering the interdependence between hypertension and the inflammatory response for the patient affected by Covid 19 through mathematical modeling and computer-based analysis | 
| i | 
| Inductive Vs Transductive SVM | Transmembrane Protein Inter-Helical Residue Contacts Prediction Using Transductive Support Vector Machines | 
| Inflammatory response | Uncovering the interdependence between hypertension and the inflammatory response for the patient affected by Covid 19 through mathematical modeling and computer-based analysis | 
| Inter-Helical Residue Contacts | Transmembrane Protein Inter-Helical Residue Contacts Prediction Using Transductive Support Vector Machines | 
| m | 
| machine learning | Classifying Protein Families with Learned Compressed Representations | 
| mammalian cell cycle | Uncovering the particularities of the dynamical interaction between cancer-related Epithelial-Mesenchymal Transition and the Mammalian Cell Cycle: a feedback-based Boolean networks interconnection approach | 
| medical systems biology | Uncovering the role of mutations in Epithelial-to-Mesenchymal transition through computational analysis of the underlying gene regulatory network | 
| Methematical modeling | Uncovering the interdependence between hypertension and the inflammatory response for the patient affected by Covid 19 through mathematical modeling and computer-based analysis | 
| multi-omics | Biomarker discovery in multi-omics datasets using tensor decompositions; A comprehensive review | 
| n | 
| neural network | Classifying Protein Families with Learned Compressed Representations | 
| o | 
| OpenACC | The Velvet Assembler Using OpenACC Directives | 
| p | 
| parallel program | The Velvet Assembler Using OpenACC Directives | 
| Protein family classification | Classifying Protein Families with Learned Compressed Representations | 
| r | 
| reachability analysis | Uncovering the role of mutations in Epithelial-to-Mesenchymal transition through computational analysis of the underlying gene regulatory network | 
| s | 
| semi-tensor product | Uncovering the role of mutations in Epithelial-to-Mesenchymal transition through computational analysis of the underlying gene regulatory network | 
| systems biology | Uncovering the interdependence between hypertension and the inflammatory response for the patient affected by Covid 19 through mathematical modeling and computer-based analysis Clarifying the biological nature of the interaction between the systems-based epigenetic landscape and the epigenome | 
| Systems biology of cancer | Uncovering the particularities of the dynamical interaction between cancer-related Epithelial-Mesenchymal Transition and the Mammalian Cell Cycle: a feedback-based Boolean networks interconnection approach | 
| Systems-based epigenetics | Clarifying the biological nature of the interaction between the systems-based epigenetic landscape and the epigenome | 
| t | 
| tensor decompositions | Biomarker discovery in multi-omics datasets using tensor decompositions; A comprehensive review | 
| Transductive Support Vector Machines | Transmembrane Protein Inter-Helical Residue Contacts Prediction Using Transductive Support Vector Machines | 
| transmembrane protein | Transmembrane Protein Inter-Helical Residue Contacts Prediction Using Transductive Support Vector Machines | 
| v | 
| VAE | Classifying Protein Families with Learned Compressed Representations | 
| Velvet | The Velvet Assembler Using OpenACC Directives |