BiCOB 2019:BibTeX Entries

Volume

@proceedings{BiCOB2019,
  title     = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340}}

Papers

@inproceedings{BiCOB2019:HPC_BLAST_Distributed_BLAST_for,
  author    = {Shane Sawyer and Mitchel Horton and Chad Burdyshaw and Glenn Brook and Bhanu Rekapalli},
  title     = {HPC-BLAST: Distributed BLAST for Modern HPC Clusters.},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {1--14},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/BxHL},
  doi       = {10.29007/qm7h}}

@inproceedings{BiCOB2019:gcn.MOPS_Accelerating_cn.MOPS_with,
  author    = {Mohammad Alkhamis and Amirali Baniasadi},
  title     = {gcn.MOPS: Accelerating cn.MOPS with GPU},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {15--26},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/t6bD},
  doi       = {10.29007/hb5r}}

@inproceedings{BiCOB2019:Identifying_DNA_Sequence_Motifs,
  author    = {Hassan Aldarwish and David Keller and Elena Harris},
  title     = {Identifying DNA Sequence Motifs of Pdx-1 and NeuroD1 Transcription Factors},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {27--35},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/W7XF},
  doi       = {10.29007/sfxr}}

@inproceedings{BiCOB2019:DALIGNER_Performance_Evaluation_on,
  author    = {Evaldo Costa and Gabriel Silva and Marcello Teixeira},
  title     = {DALIGNER Performance Evaluation on Intel Xeon Phi Architecture},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {36--47},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/Qdtd},
  doi       = {10.29007/j5cs}}

@inproceedings{BiCOB2019:An_Enrichment_Method_For,
  author    = {Yuan Liu and Yongchao Ma and Evan Salsman and Frank Manthey and Elias Elias and Xuehui Li and Changhui Yan},
  title     = {An Enrichment Method For Mapping Ambiguous Reads To Reference Genome For NGS Analysis},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {48--54},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/xH29},
  doi       = {10.29007/kw3c}}

@inproceedings{BiCOB2019:Comparison_of_Type_I,
  author    = {Zifeng Liang},
  title     = {Comparison of Type I Interferon Expression in Adult and Neonatal Mice during Respiratory Viral Infection},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {55--64},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/hSFC},
  doi       = {10.29007/ltkw}}

@inproceedings{BiCOB2019:Understand_Effective_Coverage_by,
  author    = {Shanshan Gao and Quang Tran and Vinhthuy Phan},
  title     = {Understand Effective Coverage by Mapped Reads using Genome Repeat Complexity},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {65--73},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/7cBK},
  doi       = {10.29007/krbn}}

@inproceedings{BiCOB2019:Polygraph_Data_Structure_for,
  author    = {Masaki Fujimoto and Cole Lyman and Mark Clement},
  title     = {The Polygraph: A Data Structure for Genome Alignment and Variation Detection},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {74--83},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/3rmK},
  doi       = {10.29007/txxd}}

@inproceedings{BiCOB2019:Improving_Classification_with_CNNs,
  author    = {Allison Rossetto and Wenjin Zhou},
  title     = {Improving Classification with CNNs using Wavelet Pooling with Nesterov-Accelerated Adam},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {84--93},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/6Mbb},
  doi       = {10.29007/9c5j}}

@inproceedings{BiCOB2019:Predicting_high_cost_patients_by,
  author    = {Isabella Eigner and Freimut Bodendorf and Nilmini Wickramasinghe},
  title     = {Predicting high-cost patients by Machine Learning: A case study in an Australian private hospital group},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {94--103},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/pZqS},
  doi       = {10.29007/jw6h}}

@inproceedings{BiCOB2019:New_Look_at_Codon,
  author    = {Gabriel Wright and Anabel Rodriguez and Patricia Clark and Scott Emrich},
  title     = {A New Look at Codon Usage and Protein Expression},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {104--112},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/z77C},
  doi       = {10.29007/d4tz}}

@inproceedings{BiCOB2019:Prediction_of_MoRFs_Based,
  author    = {Fang Chun and Yoshitaka Moriwaki and Caihong Li and Kentaro Shimizu},
  title     = {Prediction of MoRFs Based on n-gram Convolutional Neural Network},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {113--119},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/ZSlw},
  doi       = {10.29007/5k4z}}

@inproceedings{BiCOB2019:Robust_Fuzzy_Cluster_Ensemble,
  author    = {Yan Yan and Tin Nguyen and Bobby Bryant and Frederick C. Harris},
  title     = {Robust Fuzzy Cluster Ensemble on Cancer Gene Expression Data},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {120--128},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/TnB6},
  doi       = {10.29007/38sk}}

@inproceedings{BiCOB2019:SVM_Model_for_Candidate,
  author    = {Wageesha Rasanjana and Sandun Rajapaksa and Indika Perera and Dulani Meedeniya},
  title     = {A SVM Model for Candidate Y-chromosome Gene Discovery in Prostate Cancer},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {129--138},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/nV39},
  doi       = {10.29007/3nzw}}

@inproceedings{BiCOB2019:Colorectal_Cancer_Outcome_Prediction,
  author    = {Xingzhi Yue and Neofytos Dimitriou and Peter Caie and David Harrison and Ognjen Arandjelovic},
  title     = {Colorectal Cancer Outcome Prediction from H\textbackslash{}\&E Whole Slide Images using Machine Learning and Automatically Inferred Phenotype Profiles},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {139--149},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/M7NT},
  doi       = {10.29007/n912}}

@inproceedings{BiCOB2019:Petri_nets_and_ODE,
  author    = {Daria Kogut and Kaja Gutowska and Aleksandra Potera\{\textbackslash{}l\}a-Hejmo and Jaros\{\textbackslash{}l\}aw \textbackslash{}'Smieja and Dorota Formanowicz and Piotr Formanowicz},
  title     = {Petri nets and ODE as complementary tools in analysis of signaling pathways},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {150--160},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/kNR1},
  doi       = {10.29007/542h}}

@inproceedings{BiCOB2019:Equipping_Decoy_Generation_Algorithms,
  author    = {Ahmed Bin Zaman and Amarda Shehu},
  title     = {Equipping Decoy Generation Algorithms for Template-free Protein Structure Prediction with Maps of the Protein Conformation Space},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {161--169},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/Vcvg},
  doi       = {10.29007/j5p9}}

@inproceedings{BiCOB2019:Statistical_Analysis_of_GLCM,
  author    = {Abia Khan and Kavery Nivana Theethira Poonacha and Adrian Britt and Benjamin McSweeney and Nicolette Santos and Grace Donovan and Valerie Yurk and Tara Scully},
  title     = {Statistical Analysis of GLCM Texture Features and Microstructures in SEM Images of Crassostrea virginica Exposed to Atrazine},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {170--180},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/QZqg},
  doi       = {10.29007/59bk}}

@inproceedings{BiCOB2019:Connecting_Molecular_Energy_Landscape,
  author    = {Kazi Lutful Kabir and Nasrin Akhter and Amarda Shehu},
  title     = {Connecting Molecular Energy Landscape Analysis with Markov Model-based Analysis of Equilibrium Structural Dynamics},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {181--189},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/nv7M},
  doi       = {10.29007/tmgc}}

@inproceedings{BiCOB2019:Prediction_Of_Novel_Pirna,
  author    = {Tamer Aldwairi and Federico Hoffmann and Andy Perkins},
  title     = {Prediction Of Novel Pirna Rat Clusters Based On Mouse Pirna Clusters Using Downstream and Upstream Analysis},
  booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
  editor    = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
  series    = {EPiC Series in Computing},
  volume    = {60},
  pages     = {190--199},
  year      = {2019},
  publisher = {EasyChair},
  bibsource = {EasyChair, https://easychair.org},
  issn      = {2398-7340},
  url       = {https://easychair.org/publications/paper/h3mb},
  doi       = {10.29007/zwxg}}